Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015921451.1_cds_XP_016470396.1_62850
CDS Infomation

[gene=LOC107792673] [db_xref=GeneID:107792673] [protein=laccase-7-like] [protein_id=XP_016470396.1] [location=complement(join(40614..40744,41135..42091,42195..42323,43189..43433,43876..44027,44684..44785))] [gbkey=CDS]
Sequence

ATGGCGCATCATCAGGTTTTCTTGTTTGTTTGCACTATAATAGCTCTTCTAGCTTCTTAC
TCCTCATTGGCTTCAGCTGCAGTTGTTGAGCATTCTTTTCATGTGCAAAACCGAACTATA
ACGAGACTTTGTCGTAGACAAGTGATCACTGCTGTAAATGGAAGTCTTCCTGGTCCAACC
ATACGCGTAAACGAAGGGGACACCCTTGTTGTTCATGTCTTCAACCTTTCACCTTATAAT
CTCACTATTCATTGGCATGGAGTTTTTCAGCTACTGAGTGGGTGGGCTGATGGACCCGAA
TTTTCGACCCAGTGCCCGATCCGACCCGGACATAGCTACACCTACAAGTTTAACGTAACG
GGTCAAGAAGGGACTCTTTGGTGGCATGCACATGTTTCATGGCTTAGAGCGACGGTTCAT
GGTGCACTCATTATTCGACCCAAAAAAGGAAACTCTTATCCTTTCCCTAAACCTTACAGA
GAAGTCCCTATCCTCTTAGGAGAATGGTGGAATGCCAATGTTGTGGACGTGGAGAATGAA
GGGCTAGCTAGTGGTGGTGCACCTAATAACTCTGATGCTTACACCATTAATGGATGGCCG
GGAGATCTTTACCCTTGCTCTGTTAATCAAACATACAAGCTGACAGTGAAACATGGGAAA
ACATATCTCCTTCGTATCATCAATGCTGCACTCAATAACCAGCTCTTTTTTAAGATCGCA
AACCATAAAATGAAAGTTGTCGCGGTTGATGCTGCTTACACTGATCCTTACGTTACGGAC
GTAGTCGTCACCGGACCAGGTCAGACGACCGACGTCCTCTTGACGGCCGATCAGGCACCG
GCGTCGTACTACATGGCGGCTAACCCCTACGCTAGTGCAGCCGGGGTACCATTTGACAAC
ACAACCACAAGAGGAATTATTATATATGAAGGTGCACAAACATCAACTCCATTAATGCCA
ATTTTACCAGCCTTTAATGACACACCAACAGCCCATAAATTCTTCACCAATTTAACTGGG
CTTGTAACTGGGCCATTTTGGATCCCTCCACCTCGTAAAGTGGATGAGCACATGTTTATT
ACTATTGGGCTGGGCCTAACTGCTTGTAATAGACAAGGAAATGCAACATGTGGAGGCCCA
AATGGACAAAGATTTGCTGCCAGTATGAACAATGCATCTTTCCAATTCCCTGACAAGATT
TCAATGTTGGAGGCATTTTTCCACAATGTGAATGGAGTTTACACCACTGATTTCCCAAAC
CAACCACCACTGAAATTTGACTACACAAATGCTAATAATAGCATGAATCCTGCTATTATA
ATGACTACAAAGTCTACTAAAGTGAAGAAAGTTAAGTTCAATGCCACAGTTGAGATTGTG
TTCCAAAATACTGCTTTGATTGGGATAGAAAACCATCCTATTCACTTGCATGGATTTAAC
TTCCATGTCTTGGCTCAAGGATTTGGAAATTATAACCCTGCGGTTGATCGGAAAAAATTT
AACCTTTTCAATCCACAAGAACGTAACACTATTGGTGTTCCAGTTGGAGGATGGGCTGTC
ATTAGATTCCGAGCTAATAATCCAGGTGTATGGTTGACGCATTGTCATTTGGATGTTCAC
TTGCCTTGGGGATTAGCCACATCATTTGTTGTTGAGAATGGGCCAACACCATCAACCAGG
CTACCTCCTCCCCCACCAGATCTACCTAAATGCTAG

Peptide Sequence

PEP ID

XP_016470396.1
PEP Infomation

PREDICTED: laccase-7-like [Nicotiana tabacum]
Sequence

MAHHQVFLFVCTIIALLASYSSLASAAVVEHSFHVQNRTITRLCRRQVITAVNGSLPGPT
IRVNEGDTLVVHVFNLSPYNLTIHWHGVFQLLSGWADGPEFSTQCPIRPGHSYTYKFNVT
GQEGTLWWHAHVSWLRATVHGALIIRPKKGNSYPFPKPYREVPILLGEWWNANVVDVENE
GLASGGAPNNSDAYTINGWPGDLYPCSVNQTYKLTVKHGKTYLLRIINAALNNQLFFKIA
NHKMKVVAVDAAYTDPYVTDVVVTGPGQTTDVLLTADQAPASYYMAANPYASAAGVPFDN
TTTRGIIIYEGAQTSTPLMPILPAFNDTPTAHKFFTNLTGLVTGPFWIPPPRKVDEHMFI
TIGLGLTACNRQGNATCGGPNGQRFAASMNNASFQFPDKISMLEAFFHNVNGVYTTDFPN
QPPLKFDYTNANNSMNPAIIMTTKSTKVKKVKFNATVEIVFQNTALIGIENHPIHLHGFN
FHVLAQGFGNYNPAVDRKKFNLFNPQERNTIGVPVGGWAVIRFRANNPGVWLTHCHLDVH
LPWGLATSFVVENGPTPSTRLPPPPPDLPKC

Transcript Sequence

Gene sequence data has not been registered.